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Category: Docker

Another update of bitools

Another update of bitools

During the last two weeks, I updated the bitools container twice. Two new tools were added to it:

1. velvet

An easy to apply de-novo assembler that I use for metagenome studies

2. Bandage

A tool to visualize the graphs that are provided from velvet

New version of the bitools docker container

New version of the bitools docker container

I updated the docker container that I maintain (bitools) to keep all the bioinformatics tools together that I recently use. Yesterday I added the tool FEELnc to it, a tool to detect lncRNAs from RNA-seq data.

UPDATE: Apparently there was an issue with the Forkmanages perl module in the docker container, I fixed that on 7.12.2017 and udated the docker image v0.1.6 on Docker Hub.